This dataset was constructed by integrating the Derisi et al. gene expression data for 5984 Yeast genes under 7 biological conditions and 111 annotations on these genes:
The resulting matrix contains 5984 lines (genes) and 118 columns (expression levels and annotations).
|Dataset description||Short description of the dataset.|
|Derisi dataset||Data matrix of 5984 lines (genes) and 118 columns (gene expression levels and annotations). Each line contains expression profiles (discretized expression measurements) over the 7 biological conditions and at most 111 gene annotations (15 GO terms, 16 KEGG pathways, 25 promoters, 20 interaction annotations, 15 phenotypes and 20 Pubmed IDs).|
Co-expressed Gene Groups Analysis (CGGA): An automatic tool for the interpretation of microarray experiments, Ricardo Martinez, Nicolas Pasquier, Claude Pasquier, Martine Collard and Lucero Lopez-Perez, Journal of Integrative Bioinformatics, 3:2(1-12), 2006.
The bi-clusters extracted from this dataset can be downloaded on the CGGA page.