Publications du projet IADB
Reminder:
- Put the standard acknowledgement in the publication text (only
acknowledged publications are recognized by the ANR): "This
work is partly funded by the French government labelled PIA
program under its IDEX UCAJEDI project (ANR-15-IDEX-0001). "
- Register the publications in HAL (hal.univ-cotedazur.fr
or hal.archives-ouvertes.fr)
and specify in the "ANR project" metadata the affiliation to
the IDEX UCAJEDI (enter "JEDI" in the ANR field and select the
project name).
- Register the founding by IADB project.
Papers
- Tobias Mayer, Elena Cabrio, Marco Lippi, Paolo Torroni, Serena Villata: Argument Mining on Clinical
Trials. In:
Proceedings of the 7th International Conference on
Computational Models of Argument (COMMA- 2018): 137-148.
- Tobias Mayer, Elena Cabrio, Serena Villata: Evidence Type Classification in Randomized
Controlled Trials. 5th workshop on an Argument
Mining (Argument Mining 2018).
- John Anderson Garcia Heano, Fréedéric Precioso,
Pascal Staccini and Michel Riveill. Parallel and
Distributed Processing for Unsupervised Patient Phenotype
Representation, 5th join Conference CLCAR &
HPC-LATAM (CARLA2018).
- Edson Florez, Frederic Precioso, Michel Riveill,
Romaric Pighetti, Named
Entity Recognition using Neural Networks for Clinical
Notes. on International Workshop on Medication and
Adverse Drug Event Detection (MADE 2018), PMLR 90:7-15
Presentation
Dataset
- Tobias Mayer, Annotated dataset on randomized clinical trials
from PubMed documents, 2018
Posters
- Amina Ghrissi, Vicente Zarzoso, "Training Neural Networks: A
Tensor-Based Approach", in: EURASIP Summer School on
Tensor-Based Signal Processing, Leuven, Belgium, Aug. 27-31,
2018.
- Pedro Marinho R. de Olivieira, Vicente Zarzoso, "Block Term
Decomposition for Atrial Activity Extraction in Atrial
Fibrillation ECGs", in: EURASIP Summer School on Tensor-Based
Signal Processing, Leuven, Belgium, Aug. 27-31, 2018.
Video
PhD thesis
Master final thesis
- Mohamed Limam, Classification de Signaux Cardiaques, Master
IFI - Informatique Fondements et Ingénierie, UNS, 2017
- Alessandro Vasquez, Analysis and classification of heart
signals’, Master RIF - Recherche en Informatique Fondamentale,
UNS, 2018
- Anouar Rkhami, Parallel machine learning for medical data on a
Jetson TX2 cluster - Master IFI - Informatique Fondements et
Ingénierie, UNS 2018
- Fatimazahra Imami, Parallélisation des réseaux de
neurones sur un cluster de jetson TX2 pour la classification des
données médicales, Ingénieur IMT Atlantique, 2018
- Pierre Tramaloni, Analyse multimodale multi-échelle de la
complexité de la fibrillation atriale persistante, Master on
Medical Imaging, Karlsruher Institute of Technology (KIT), 2018
Autres publications des membres du projet, sur la thématique
IADB - depuis le démarrage d'IADB
- Pedro Marinho R. de Oliveira, Vicente Zarzoso: Source Analysis and Selection Using
Block Term Decomposition in Atrial Fibrillation. LVA/ICA 2018: 46-56
- Pedro
Marinho R. de Oliviera, Vicente Zarzoso: Block Term
Decomposition Analysis in Long Segments of Atrial
Fibrillation ECGs, in: Proc. Simpósio Brasileiro de
Telecomunicações et Processamento de Sinais, Campina Grande,
PB, Brasil, 16-19 set. 2018.
- Mohamed
Limam, Frederic Precioso: Atrial
fibrillation detection and ECG classification based on
convolutional recurrent neural network,
Computing in Cardiology (CinC), 2017.
- V. Lacroix-Hugues, David Darmon, C. Pradier, Pascal Staccini: Creation of the First French Database
in Primary Care Using the ICPC2: Feasibility Study. MedInfo 2017: 462-466
- Antonio R. Hidalgo-Muñoz, Decebal Gabriel Latcu, Marianna Meo, Olivier Meste, Irina Popescu, Nadir Saoudi, Vicente Zarzoso: Spectral and spatiotemporal
variability ECG parameters linked to catheter ablation outcome
in persistent atrial fibrillation. Comp. in Bio. and Med. 88: 126-131 (2017)
- Layli S. Goldoozian, Edmond Zahedi, Vicente Zarzoso: Time-varying assessment of heart rate
variability parameters using respiratory information. Comp. in Bio. and Med. 89: 355-367 (2017)
- Addisson Salazar, Vicente Zarzoso, Manuel Rosa-Zurera, Luis Vergara: Fusion Methods for Biosignal
Analysis: Theory and Applications. Comp. Int. and Neurosc.2017: 7152546:1-7152546:2 (2017)
- Vicente Zarzoso: Parameter estimation in block term
decomposition for noninvasive atrial fibrillation analysis. CAMSAP 2017: 1-5
- Alex Chaves Alberto, Gabriel Azevedo Limeira, Roberto Coury Pedrosa, Vicente Zarzoso, Jurandir Nadal: ECG-Based Predictors of Sudden
Cardiac Death in Chagas' Disease. CinC 2017
Publications depuis 2013, sur la thématique d'IADB - avant le
démarrage d'IADB
- Marianne
Sarazin, Amine
El Merini, Pascal Staccini: Impact of a Computer System
and the Encoding Staff Organization on the Encoding Stays
and on Health Institution Financial Production in France. MIE 2016: 14-17
- Lucas
N. Ribeiro, André
Lima Férrer de Almeida, Vicente Zarzoso:
Enhanced block term decomposition for atrial activity
extraction in atrial fibrillation ECG. SAM 2016: 1-5
- Franck Michel, Loic Djimenou,
Catherine Faron-Zucker, Johan Montagnat. "Translation of
Heterogeneous Databases into RDF, and Application to the
Construction of a SKOS Taxonomical Reference" in Web
Information Systems and Technologies: 11th International
Conference, WEBIST 2015, Revised Selected Papers, pages
275-296, Springer, 2016, 978-3-319-30995-8 [http://hal.archives-ouvertes.fr/hal-01337308]
- Franck Michel, Catherine
Faron-Zucker, Johan Montagnat. "A Mapping-based Method
to Query MongoDB Documents with SPARQL" in Proceedings
of the 27th International Conference on Database and Expert
Systems Applications (DEXA'16), Porto, Portugal, September
2016 [http://hal.archives-ouvertes.fr/hal-01330146]
- Franck Michel, Catherine
Faron-Zucker, Johan Montagnat. "A Generic Mapping-Based
Query Translation from SPARQL to Various Target Database
Query Languages" in Proceedings of the 12th
International Confenrence on Web Information Systems and
Technologies (WEBIST 2016), Rome, Italy, April 2016 [http://hal.archives-ouvertes.fr/hal-01280951]
- Mitko
Veta, Paul
J. van Diest, Stefan
M. Willems, Haibo
Wang, Anant
Madabhushi, Angel
Cruz-Roa, Fabio
A. González, Anders
Boesen Lindbo Larsen, Jacob
S. Vestergaard, Anders
B. Dahl, Dan
C. Ciresan, Jürgen
Schmidhuber, Alessandro
Giusti, Luca
Maria Gambardella, F.
Boray Tek, Thomas
Walter, Ching-Wei,
Rajpoot, Evdokia
Arkoumani, Miangela
M. Lacle, Max
A. Viergever, Josien
P. W. Pluim: Assessment of
algorithms for mitosis detection in breast cancer
histopathology images. Medical Image Analysis 20(1): 237-248 (2015)
- Marianna
Meo, Antonio
R. Hidalgo-Muñoz, Vicente Zarzoso, Olivier
Meste, Decebal
Gabriel Latcu, Nadir
Saoudi: F-wave Amplitude
Stability on Multiple Electrocardiogram Leads in Atrial
Fibrillation. CinC 2015: 505-508
- Layli
S. Goldoozian, Antonio
R. Hidalgo-Muñoz, Vicente Zarzoso, Edmond
Zahedi: Parameter
Estimation of a Mathematical Model Describing the
Cardiovascular-Respiratory Interaction. CinC 2015: 617-620
- Antonio
R. Hidalgo-Muñoz, Ana
Maria Tomé, Decebal
Gabriel Latcu, Vicente Zarzoso: Empirical mode decomposition
of multiple ECG leads for catheter ablation long-term
outcome prediction in persistent atrial fibrillation. EMBC 2015: 105-108
- Lucas
N. Ribeiro, Antonio
R. Hidalgo-Muñoz, Vicente Zarzoso: Atrial signal extraction in
atrial fibrillation electrocardiograms using a tensor
decomposition approach. EMBC 2015: 6987-6990
- Lucas
N. Ribeiro, Antonio
R. Hidalgo-Muñoz, Gérard
Favier, João
Cesar M. Mota, André
L. F. de Almeida, Vicente Zarzoso: A
tensor decomposition approach to noninvasive atrial activity
extraction in atrial fibrillation ECG. EUSIPCO 2015: 2576-2580
- Antonio
R. Hidalgo-Muñoz, Ana
Maria Tomé, Vicente Zarzoso:
Empirical mode decomposition for noninvasive atrial
fibrillation dominant frequency estimation. EUSIPCO 2015: 2581-2585
- Franck Michel, Loic Djimenou,
Catherine Faron-Zucker, Johan Montagnat. "Translation of
Relational and Non-Relational Databases into RDF with
xR2RML" in Proceedings of the 11th International
Confenrence on Web Information Systems and Technologies
(WEBIST 2015), Lisbon, Portugal, May 2015 [http://hal.archives-ouvertes.fr/hal-01207828]
- Leila
Meziou, Aymeric
Histace, Frédéric Precioso, Olivier
Romain, Xavier
Dray, Bertrand
Granado, Bogdan
J. Matuszewski: Computer-Assisted Segmentation
of Videocapsule Images Using Alpha-Divergence-Based Active
Contour in the Framework of Intestinal Pathologies
Detection. Int. J. Biomedical Imaging 2014: 428583:1-428583:10 (2014)
- Mitko
Veta, Paul
J. van Diest, Stefan
M. Willems, Haibo
Wang, Anant
Madabhushi, Angel
Cruz-Roa, Fabio
A. González, Anders
Boesen Lindbo Larsen, Jacob
S. Vestergaard, Anders
B. Dahl, Dan
C. Ciresan, Jürgen
Schmidhuber, Alessandro
Giusti, Luca
Maria Gambardella, F.
Boray Tek, Thomas
Walter, Ching-Wei
Wang, Satoshi
Kondo, Bogdan
J. Matuszewski, Frédéric Precioso, Violet
Snell, Josef
Kittler, Teófilo
Emídio de Campos, Adnan
Mujahid Khan, Nasir
M. Rajpoot, Evdokia
Arkoumani, Miangela
M. Lacle, Max
A. Viergever, Josien
P. W. Pluim: Assessment of algorithms for
mitosis detection in breast cancer histopathology images. CoRR abs/1411.5825 (2014)
- David
Darmon, Rémy
Sauvant, Pascal Staccini, Laurent
Letrilliart: Which functionalities are
available in the electronic health record systems used by
French general practitioners? An assessment study of 15
systems. I. J. Medical Informatics 83(1): 37-46 (2014)
- Bernard
Gibaud, Germain
Forestier, Hugues
Benoit-Cattin, Frederic
Cervenansky, Patrick
Clarysse, Denis
Friboulet, Alban
Gaignard, Patrick
Hugonnard, Carole
Lartizien, Hervé
Liebgott, Johan Montagnat, Joachim
Tabary, Tristan
Glatard: OntoVIP: An ontology for the
annotation of object models used for medical image
simulation. Journal of Biomedical Informatics 52: 279-292 (2014)
- Sébastien
Cipière, Guillaume
Erétéo, Alban
Gaignard, Nouha
Boujelben, Sébastien
Gaspard, Vincent
Breton, Frederic
Cervenansky, David
R. C. Hill, Tristan
Glatard, David
Manset, Johan Montagnat, Jérôme
Revillard, Lydia
Maigne: Global Initiative for Sentinel
e-Health Network on Grid (GINSENG): Medical Data Integration
and Semantic Developments for Epidemiology. CCGRID 2014: 755-763
- Marianna
Meo, Vicente Zarzoso, Olivier
Meste, Decebal
Gabriel Latcu, Nadir
Saoudi: Joint Entropy for Spatial
Information Retrieval from Orthogonal Heart Planes Improves
Catheter Ablation Outcome Prediction in Persistent Atrial
Fibrillation. CinC 2014: 901-904
- Hortense
A. Kirisli, Michiel
Schaap, Coert
Metz, A. S.
Dharampal, W. B.
Meijboom, S. L.
Papadopoulou, A.
Dedic, K.
Nieman, Michiel
A. de Graaf, M. F.
L. Meijs, M. J.
Cramer, Alexander
Broersen, Suheyla
Cetin, Abouzar
Eslami, Leonardo
Florez-Valencia, Kuo-Lung
Lor, Bogdan
J. Matuszewski, Imen
Melki, Brian
Mohr, Ilkay
Öksüz, Rahil
Khurram Shahzad, Chunliang
Wang, Pieter
H. Kitslaar, Gözde
B. Ünal, Amin
Katouzian, Maciej
Orkisz, Chung-Ming
Chen, Frédéric Precioso, Laurent
Najman, S.
Masood, Devrim
Ünay, Lucas
J. van Vliet, Rodrigo
Moreno, Roman
Goldenberg, Erald
Vuçini, Gabriel
P. Krestin, Wiro
J. Niessen, Theo
van Walsum:
Standardized evaluation framework
for evaluating coronary artery stenosis detection, stenosis
quantification and lumen segmentation algorithms in computed
tomography angiography. Medical Image Analysis 17(8): 859-876 (2013)
- Tristan
Glatard, Carole
Lartizien, Bernard
Gibaud, Rafael
Ferreira da Silva, Germain
Forestier, Frederic
Cervenansky, Martino
Alessandrini, Hugues
Benoit-Cattin, Olivier
Bernard, Sorina
Camarasu-Pop, Nadia
Cerezo, Patrick
Clarysse, Alban
Gaignard, Patrick
Hugonnard, Hervé
Liebgott, Simon
Marache, Adrien
Marion, Johan Montagnat, Joachim
Tabary, Denis
Friboulet: A Virtual Imaging Platform for
Multi-Modality Medical Image Simulation. IEEE Trans. Med. Imaging 32(1): 110-118 (2013)
- Marianna
Meo, Vicente Zarzoso, Olivier
Meste, Decebal
Gabriel Latcu, Nadir
Saoudi: Catheter ablation
outcome prediction in persistent atrial fibrillation using
weighted principal component analysis. Biomed. Signal Proc. and Control 8(6): 958-968 (2013)
- Marianna
Meo, Vicente Zarzoso, Olivier
Meste, Decebal
Gabriel Latcu, Nadir
Saoudi: Spatial Variability of the
12-Lead Surface ECG as a Tool for Noninvasive Prediction of
Catheter Ablation Outcome in Persistent Atrial Fibrillation. IEEE Trans. Biomed. Engineering 60(1): 20-27 (2013)
- Marianna
Meo, Vicente Zarzoso, Olivier
Meste, Decebal
Gabriel Latcu, Nadir
Saoudi: Noninvasive prediction of
catheter ablation acute outcome in persistent atrial
fibrillation based on logistic regression of ECG
fibrillatory wave amplitude and spatio-temporal variability. EMBC 2013: 5821-5824
- Michele
Garibaldi, Vicente Zarzoso:
Exploiting intracardiac and surface recording modalities for
atrial signal extraction in atrial fibrillation. EMBC 2013: 6015-6018